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HPC:Software

From HPC wiki
Revision as of 20:32, 19 March 2015 by Asrini (talk | contribs) (→‎Software currently installed on the PMACS cluster)
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Other Pages

  • HPC Main Page
  • Connecting to the PMACS cluster
  • User Guide

Software currently installed on the PMACS cluster

  • AllPaths-LG
  • bamtools
  • bcl2fastq
  • BLAST+
  • BLAT
  • Boost
  • bowtie
  • bwa
  • CASAVA
  • Cufflinks
  • devtoolset-2
  • Environment Modules
  • eQtlBma
  • FastQC
  • FASTX-Toolkit
  • Homer
  • Java
  • kClust
  • mpich2
  • NGSUtils
  • NAMD-2.9
  • openmpi
  • Perl
  • Picard Tools
  • Python
  • R
  • Ruby
  • RUM
  • samtools
  • Sailfish
  • SCons
  • SRA Toolkit
  • STAR
  • TopHat
  • Trimmomatic
Retrieved from "https://hpcwiki.pmacs.upenn.edu/wiki/index.php?title=HPC:Software&oldid=369"
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