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Difference between revisions of "HPC:Software"
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Revision as of 15:18, 20 March 2015
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Asrini
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→Software currently installed on the PMACS cluster
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← Older edit
Revision as of 15:19, 20 March 2015
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Asrini
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→Software currently installed on the PMACS cluster
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Newer edit →
Line 40:
Line 40:
* [[HPC:tophat| TopHat]]
* [[HPC:tophat| TopHat]]
* [[HPC:Trimmomatic| Trimmomatic]]
* [[HPC:Trimmomatic| Trimmomatic]]
−
* [[HPC:zlib|
zbli
]]
+
* [[HPC:zlib|
zlib
]]
Revision as of 15:19, 20 March 2015
Other Pages
HPC Main Page
Connecting to the PMACS cluster
User Guide
Software currently installed on the PMACS cluster
AllPaths-LG
bamtools
bcl2fastq
BLAST+
BLAT
Boost
bowtie
bwa
CASAVA
Cufflinks
devtoolset-2
Environment Modules
eQtlBma
FastQC
FASTX-Toolkit
Homer
Java
kClust
mpich2
NGSUtils
NAMD-2.9
openmpi
Perl
Picard Tools
Python
R
Ruby
RUM
samtools
Sailfish
SCons
SRA Toolkit
STAR
TopHat
Trimmomatic
zlib
Tools
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