Difference between revisions of "HPC:CASAVA"
From HPC wiki
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=== CASAVA === | === CASAVA === | ||
CASAVA v1.8.2 is installed across all HPC nodes. | CASAVA v1.8.2 is installed across all HPC nodes. | ||
Latest revision as of 21:19, 5 February 2026
CASAVA
CASAVA v1.8.2 is installed across all HPC nodes.
Usage
CASAVA can be loaded as a module:
[asrini@node061 ~]$ module load CASAVA-v1.8.2 [asrini@node061 ~]$ which CASAVA /opt/software/CASAVA/v1.8.2/bin/CASAVA [asrini@node061 ~]$ CASAVA -v INFO: @CASAVA_VERSION_FULL@ [asrini@node061 ~]$ CASAVA -h INFO: Usage: CASAVA [Options] -a, --applicationType=TYPE - type of analysis [AlignContig, CheckOrder, IndelFinder, SmallAssembler, ExportExample, Export2Fastq]
