Difference between revisions of "HPC:CASAVA"
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(Created page with "=== CASAVA === CASAVA v1.8.2 is installed across all HPC nodes. ==== Usage ==== CASAVA can be loaded as a module: <pre> [asrini@node061 ~]$ module load CASAVA-v1.8.2 [asri...") |
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=== Other Pages === | === Other Pages === | ||
| + | ---- | ||
| + | <div class="mw-collapsible mw-collapsed"> | ||
| + | *[[HPC:FAQ|HPC FAQ ]] | ||
| + | *[[HPC:Login|Connecting to the PMACS cluster]] | ||
| + | *[[HPC:User_Guide|User Guide]] | ||
*[[HPC:Software|Available Software]] | *[[HPC:Software|Available Software]] | ||
| − | *[[HPC: | + | *[[HPC:Archive System|PMACS Archive System]] |
| − | + | </div> | |
| − | |||
Latest revision as of 15:28, 13 August 2019
CASAVA
CASAVA v1.8.2 is installed across all HPC nodes.
Usage
CASAVA can be loaded as a module:
[asrini@node061 ~]$ module load CASAVA-v1.8.2 [asrini@node061 ~]$ which CASAVA /opt/software/CASAVA/v1.8.2/bin/CASAVA [asrini@node061 ~]$ CASAVA -v INFO: @CASAVA_VERSION_FULL@ [asrini@node061 ~]$ CASAVA -h INFO: Usage: CASAVA [Options] -a, --applicationType=TYPE - type of analysis [AlignContig, CheckOrder, IndelFinder, SmallAssembler, ExportExample, Export2Fastq]
