Difference between revisions of "HPC:GDAL"
From HPC wiki
| (12 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
| − | This page provides instructions for installing GDAL on our HPC system. The instructions below are for v2.2.3 of the GDAL package but should work for the latest version of GDAL in the 2.x series - v2.4.2 (at the time of writing these instructions) | + | This page provides instructions for installing GDAL on our HPC system. The instructions below are for v2.2.3 of the GDAL package but should work for the latest version of GDAL in the 2.x series - v2.4.2 (at the time of writing these instructions). |
| − | STEP 0: Launch an interactive session | + | == GDAL Installation == |
| + | ---- | ||
| + | <div class="mw-collapsible mw-collapsed"> | ||
| + | STEP 0: Launch an interactive session | ||
| + | |||
| + | |||
| + | '''ALL PACKAGE INSTALLATION LISTED BELOW MUST BE DONE IN AN INTERACTIVE SESSION''' | ||
<pre> | <pre> | ||
| Line 13: | Line 19: | ||
</pre> | </pre> | ||
| − | STEP 1: Download GDAL source and md5sum files | + | STEP 1: Download GDAL source and md5sum files |
<pre> | <pre> | ||
| Line 29: | Line 35: | ||
</pre> | </pre> | ||
| − | STEP 3: Unpack tarball and install | + | STEP 3: Unpack tarball and install |
'''NOTE: The instructions below will install GDAL under $HOME/software; Change the "--prefix" path if you wish to install this package elsewhere.''' | '''NOTE: The instructions below will install GDAL under $HOME/software; Change the "--prefix" path if you wish to install this package elsewhere.''' | ||
| Line 42: | Line 48: | ||
</pre> | </pre> | ||
| − | === Other Pages | + | </div> |
| + | |||
| + | == r-gdal package installation == | ||
| + | |||
| + | See [[HPC:R#r-gdal|this]] page for r-gdal installation instructions. | ||
| + | |||
| + | == monocle3 package installation == | ||
| + | |||
| + | See [[HPC:R#monocle3|this]] page for monocle3 installation instructions. | ||
| + | |||
| + | == Other Pages == | ||
---- | ---- | ||
<div class="mw-collapsible mw-collapsed"> | <div class="mw-collapsible mw-collapsed"> | ||
Latest revision as of 16:26, 5 December 2019
This page provides instructions for installing GDAL on our HPC system. The instructions below are for v2.2.3 of the GDAL package but should work for the latest version of GDAL in the 2.x series - v2.4.2 (at the time of writing these instructions).
Contents
GDAL Installation
STEP 0: Launch an interactive session
ALL PACKAGE INSTALLATION LISTED BELOW MUST BE DONE IN AN INTERACTIVE SESSION
[asrini@consign ~]$ bsub -Is bash Job <57475473> is submitted to default queue <interactive>. <<Waiting for dispatch ...>> <<Starting on node061.hpc.local>> [asrini@node061 ~]$
STEP 1: Download GDAL source and md5sum files
wget http://download.osgeo.org/gdal/2.2.3/gdal-2.2.3.tar.gz wget http://download.osgeo.org/gdal/2.2.3/gdal-2.2.3.tar.gz.md5
STEP 2: Check the md5sum
md5sum -c gdal-2.2.3.tar.gz.md5
STEP 3: Unpack tarball and install
NOTE: The instructions below will install GDAL under $HOME/software; Change the "--prefix" path if you wish to install this package elsewhere.
tar -zxvf gdal-2.2.3.tar.gz cd gdal-2.2.3 ./configure --prefix=$HOME/software make make install
r-gdal package installation
See this page for r-gdal installation instructions.
monocle3 package installation
See this page for monocle3 installation instructions.
